Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLFDFFKNKGSAATATDRLKLILAKERTLNLPYMEEMRKEIIAVIQKYTKSSDIHFKTLDGNQSVETIEVEIILPK
3KU7 Chain:A ((13-76))
------------AATATDRLKLILAKERTLNLPYMEEMRKEIIAVIQKYTKSSDIHFKT---LQSVETIEVEIILP-
General information:
TITO was launched using:
RESULT:
Template:
3KU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21576 for 320 contacts (-67.4/contact) +
2D Compatibility (PS) -6558 + (NN) -1474 + (LL) 516
1D Compatibility (HY) -8800 + (ID) 3000
Total energy: -40892.0 ( -127.79 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_3KU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KU7-query.scw
PDB file :
Tito_Scwrl_3KU7.pdb
: