Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIWLLVWGLYSLAFLHAIETIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSVDAVLHLHDGGGYYRPVYIDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIENINAHLLHPIEKYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLESRVFYHLQAIEGLLNQLNIPFKRDFELNPNSVHALINDKSLWAKISSLPKMPLFNLRPKLNHFPLPSNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDHSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNESKPNETGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV |
4Q6O Chain:A ((21-437)) | ---------------------MIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAIEGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -209263 for 3545 contacts (-59.0/contact) +
2D Compatibility (PS) -43414 + (NN) -9380 + (LL) 2588
1D Compatibility (HY) -60400 + (ID) 20250
Total energy: -340119.0 ( -95.94 by residue)
QMean score : 0.467
|
|
|