Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGIKEKEIELETLKREIAQAEASLEQDFIKHMVDKTNEKVEDLFFSNKPEFYRFVFTEQNNYLREKLTDKVGRAMDLIDEIQRDKTENESLENGAKFKKRFVFELQNDLIFLRTKRNTYSAKTEHENFQEKLLAAKDTFRLIKANDFKTKIYPYQIILRLKTKHIIVFKWLKKEIIKRFVKKDLFTETLSIKITDKKGRKYALIANYNHASDIIELMLDDKTYTTTLYYQKPLFDLIKNSNFNLTIKDNTLEINQAKNAYSFKAKNTKTLEY |
3ND8 Chain:A ((541-583)) | -GVPLEEIAKLPVREEIGRMKFERDVSKIRSLIDKTNEQFEELF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ND8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4239 for 215 contacts (19.7/contact) +
2D Compatibility (PS) -4570 + (NN) -139 + (LL) 18232
1D Compatibility (HY) -2800 + (ID) 700
Total energy: 14262.0 ( 66.33 by residue)
QMean score : 0.707
|
|
|