Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGIKEKEIELETLKREIAQAEASLEQDFIKHMVDKTNEKVEDLFFSNKPEFYRFVFTEQNNYLREKLTDKVGRAMDLIDEIQRDKTENESLENGAKFKKRFVFELQNDLIFLRTKRNTYSAKTEHENFQEKLLAAKDTFRLIKANDFKTKIYPYQIILRLKTKHIIVFKWLKKEIIKRFVKKDLFTETLSIKITDKKGRKYALIANYNHASDIIELMLDDKTYTTTLYYQKPLFDLIKNSNFNLTIKDNTLEINQAKNAYSFKAKNTKTLEY
3ND8 Chain:A ((541-583))-GVPLEEIAKLPVREEIGRMKFERDVSKIRSLIDKTNEQFEELF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ND8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4239 for 215 contacts (19.7/contact) +
2D Compatibility (PS) -4570 + (NN) -139 + (LL) 18232
1D Compatibility (HY) -2800 + (ID) 700
Total energy: 14262.0 ( 66.33 by residue)
QMean score : 0.707

(partial model without unconserved sides chains):
PDB file : Tito_3ND8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ND8-query.scw
PDB file : Tito_Scwrl_3ND8.pdb: