Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVTFQVPSITCNHCVDKIEKFVGEIEGVSFIDASVEKKSVVVEFDTPATQDLIKEALLDAGQEVV
1YG0 Chain:A ((1-66))
MKATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEVV
General information:
TITO was launched using:
RESULT:
Template:
1YG0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59268 for 473 contacts (-125.3/contact) +
2D Compatibility (PS) -7116 + (NN) -2346 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 3150
Total energy: -81480.0 ( -172.26 by residue)
QMean score : 0.840
(partial model without unconserved sides chains):
PDB file :
Tito_1YG0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YG0-query.scw
PDB file :
Tito_Scwrl_1YG0.pdb
: