Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPINPLYLFPNLFTASSIFLGMMSIFYASSYQFVMACWLVVASLILDGLDGRVARLTNTTSKFGIEFDSLADVVAFGVAPSLITYFYVGYNFGRIGMAVSALFVIFGAIRLARFNISTNTSDPYSFIGIPIPAAAVLVVLCVLLDNKYHFLEGNTEKLFLGFIVLLGVLMVSNIRYPNFKKVKWNLKLFILVLIFLSLVFVRPLEALSVFMGLYLIYGIIRWIFLMVKIIFNKNKSA |
4MND Chain:A ((289-380)) | ---------PNQMTLISFLVGAFSAL-ASFFSIPLAGLLYQFSSILDGCDGEIARASLKMSKKGGYVDSILDRFVDFLFLAIIALLYP-------KTATVAMFAIFGSVMVSYTSEKYKAEFGESIRVLNYIPGKRDERIFLIMIFCLLSAISLQWIFWMFLFVAAISLTRVVVTLLAVLVS------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47683 for 621 contacts (-76.8/contact) +
2D Compatibility (PS) -9626 + (NN) -2374 + (LL) 4932
1D Compatibility (HY) -5600 + (ID) 1650
Total energy: -62001.0 ( -99.84 by residue)
QMean score : 0.224
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