Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGTND
3GWG Chain:A ((6-128))
MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGTN-
General information:
TITO was launched using:
RESULT:
Template:
3GWG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65808 for 967 contacts (-68.1/contact) +
2D Compatibility (PS) -13656 + (NN) -9170 + (LL) -76
1D Compatibility (HY) -18400 + (ID) 6050
Total energy: -113160.0 ( -117.02 by residue)
QMean score : 0.770
(partial model without unconserved sides chains):
PDB file :
Tito_3GWG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GWG-query.scw
PDB file :
Tito_Scwrl_3GWG.pdb
: