Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEFDLESYDYHLPKELIANYPVLPKEKAKLLVYERRSQTITHTTFEHVLDFFPKNALVVLNDTKVIKARLFGSKHAFLPSKTTEVFF-HRFFKG-NTALTQIKGKIKVGDKIFFDANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIKRADESLDAHEYQSVFAKHIGAVAAPTASLHFSQNALEKLLK-DFKHAFLTLHVGAGTFLSVETKDIREHQIHTEVLHIPKKSQEILQESQE----VLCIGTTALRSVEYFKRLKNPNQESF--ECDIFLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLIL |
| 1VKY Chain:A ((16-347)) | ------SEFDYELPPELIAQEPVEPRDASRLMVLHRKTQRIEHRIFREIIEYLEPGDLLVLNVSKVIPARLYARK------ASIEILLIERLEEGIWKCLVRPGQKVKKGTELVIDEDLSAVCLGRGEDGTRILKF--------QPQDDRLIFEKG----------------------------------TAGLHFTPELIEKLKKKGVQFAEVVLHV------------------HEEFYQVPKETVRKLRETRERGNRIVAVGTTTVRTLETIARL--PEQEEYVGKTDLFIYPPFEFKLVDALVTNFHLPRSTLLMLVAAFAGKDFVMEAYREAVKRRYRFFSFGDAMLIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186995 for 2097 contacts (-89.2/contact) +
2D Compatibility (PS) -28891 + (NN) -838 + (LL) 4508
1D Compatibility (HY) -25600 + (ID) 5350
Total energy: -243166.0 ( -115.96 by residue)
QMean score : 0.478
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