Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAHKERLESNLLELLQEALASLNDSELN--SLSVTKVECSKGKHHALVFV---LS-S-DHKILSKLKKAEGLIRQFVLQASGWFKCPKLSFVLDDSLEKQLRLDAIFNEIAKGKDND
2KZF Chain:A ((4-106))
PAYRKAMLESEIQKLLMEALQQLRDPRLKKDFVTFSRVELSKDKRYADVYVSFLGTPEERKETVEILNRAKGFFRTFIAKNLRLYVAPEIRFYEDKGIEASVK---------------
General information:
TITO was launched using:
RESULT:
Template:
2KZF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57252 for 598 contacts (-95.7/contact) +
2D Compatibility (PS) -10535 + (NN) -6488 + (LL) 676
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -82649.0 ( -138.21 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_2KZF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KZF-query.scw
PDB file :
Tito_Scwrl_2KZF.pdb
: