Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MLISIA-----------FLLVLCLLNYSSFRMLKSFL---TLKKIS--------RY-AYLGFFILLSAGEATFVFYRNVMPSHLFVLTSACSFVSFIAFVFSLSFYGFS------YSVEKIDFLPSRRKGLKNFLRIGF--YLALLG--YFWRGFYEGLARPKI--KETPIYLD-----KLDKELKIILLTDMHVGSLLQ------KDFVNYIVEEVNQKEVDMVLIGGDLVDENIEKVKSFLLPLNNLKST-HGTFYVPG-----------NHEYYHGIEPILSFLNTLDMTILGNE---CVHLGGINLC----GVYDYFARKRQDFAPDIDKALKKRDSSKP---TILLAHQPKQIRSLKESHSIDLVLSGHTHAGQIFPFSLLVKL-AQTYLHGLYK--HSGTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA |
| 4J1Q Chain:A ((20-445)) | HMERLMLEPVWEKQNEELSYTEHIIVLFETERSVTDSIASHMKDARVITLNEAVGHIAERYQCYMQNIFELLQSKVRKLSAGRIIIQAIVPLEKEKQLFAGVSGLFKTAEIEFSKLTAQVIEIEKPEEMIDLHLKLKDDSRRPFDKQIRYEAGYRFVKGWREMVDTLHMPWRDEGVYLITGGAGSLGLLFAKEIANRTGRSTIVLTGRSVLSEDKENELEALRSIGAEVVYREADVSDQ--HAVRHLLEEIKERYGTLNGIIHGAGSSKDRFIIHKTNEEFQEVLQPKVSGLLHVDECSKDFPLDFFIFFSSVSGCLGNAGQADYAAA--NSFMDAFAEYRRSLAASKKRFGSTISFNWPL----WEEGGM----QVGAEDEKRMLKTTGMVPMPTDSGLKAFYQGIVSDKPQVFVMEG-----------------QLQKMKQKLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244596 for 2621 contacts (-93.3/contact) +
2D Compatibility (PS) -35607 + (NN) -6145 + (LL) 2304
1D Compatibility (HY) -10800 + (ID) 3000
Total energy: -297844.0 ( -113.64 by residue)
QMean score : 0.308
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