Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMREILTNRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKSCFLYFKNHSKIGKIFSSPIYINPPFGYTNQPNFYNATIILKTSLGLRHFFALVFYIERRFGRARKRDFKDAPRTLDIDIIAFNQVILRQNDLTLPHPKWSERDSVLVPLTL----------QQILFKREEW--------
1Q0N Chain:A ((1-158))
----------------------TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAE-RWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW
General information:
TITO was launched using:
RESULT:
Template:
1Q0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80909 for 1056 contacts (-76.6/contact) +
2D Compatibility (PS) -15084 + (NN) -10855 + (LL) 2040
1D Compatibility (HY) -5600 + (ID) 2050
Total energy: -112458.0 ( -106.49 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_1Q0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q0N-query.scw
PDB file :
Tito_Scwrl_1Q0N.pdb
: