Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKKTFFVSLALALSLNAGNIQIQNMPKVKERISVPSKEDTIYSYHDSIKDSIKAVVNISTEKKIKNNFIGGGVFNDPFFQQFFGDLGGMIPKERMERALGSGVIISKD-GYIVTNNHVIDGADKIKVTIPGSNKEYSATLVGTDSESDLAVIRI-TKDNLPTIKFSDSNDILVGDLVFAIGNPFGVGESVTQGIVSALNKSGIGINSYENFIQTDASINPGNSGGALIDSRGGLVGINTAIISKTGGNHGIGFAIPSNMVKDIVTQLIKTGKIERGYLGVGLQDLSGDLQNSY--DNKEGAVVISVEKDSPAKKAGILVWDLITEVNGKKVKNTNELRNLIGSMLPNQRVTLKVIRDKKERTFTLTLAERKNPNKKETISAQNGVQGQLNGLQVEDLTQKTKRSMRLSDDVQGVLVSQVNENSPAEQAGFRQGNIITKIEEVEVKSVADFNHALEKYKGKPKRFLVLDLNQGYRIILVK |
| 3OTP Chain:A ((86-445)) | --------------------------------------------------------------------------------------------------ALGSGVIIDADKGYVVTNNHVVDNATVIKVQL-SDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLEL-QQS----------FNGIEG-------AEMSNKGKD--------QGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDS---KPS-VLALNIQRGDSTIYLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139981 for 2777 contacts (-50.4/contact) +
2D Compatibility (PS) -37557 + (NN) -13926 + (LL) 7596
1D Compatibility (HY) -32000 + (ID) 8050
Total energy: -223918.0 ( -80.63 by residue)
QMean score : 0.536
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