Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLYSL-VKKYLFSLDAEIAHEKVCQILRTLSSSPFLCRLIHSQWGYKNPKLENEILGLNFPNPLGLAAGFDKNASMLRALIAFGFGYLEAGTLTNIAQSGNEKPRLFRHIEEESLQNAMGFNNYGAILGVRAFNRFAPYKTPIGINLGKNKHIEQAHALEDYQAVLNQCLNIGDYYTFNLSSPNTPNLRDLQNKVFVNELFCMAKEM---------THKPLFLKIAPDLEIDSMLEVVNSAIEAGANGIIATNTTIDKSLVF-A--PKEMGGLSGKCLTKKSREIFKELAKAFFNKSVLVSVGGISDAKEAYERIKMGASLLQIYSAFIYKGPNLCQNILKDLVKLLQKDGFLSVKEAIGADLR |
| 1F76 Chain:A ((1-336)) | -MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFE---ALV-RQ-KVPAKPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKA-HYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVTHI--------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1F76.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -144293 for 2926 contacts (-49.3/contact) +
2D Compatibility (PS) -34569 + (NN) -13289 + (LL) 2600
1D Compatibility (HY) -22400 + (ID) 6850
Total energy: -218801.0 ( -74.78 by residue)
QMean score : 0.504
|
|
|