Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVLKLHVKAFRFETNKDYNPAYESYFLEYQEDQYLLDLLKQLKGVSYNENIALKINQIAVFEDAKVSDLVAFFSKEWVLDPLSKRYALKDLMIDEKEVLKNYEDFFKQVPYITKGEKEELEKFIQINFINPQTNPKYLGDGFFLYVKWLMKRYPTERNRLLEMISKPESGVMNFLSVAHYLYKNDDNIDHEIYELQEMLTNSKIKPWKDFSKNLLSLFQYNSNPPKTPNPPKTCALFNAYAKHLNAQALLKSAKLYLERMGQKVIDLPFCYDGGYYGKIISTHDFLTACAYNLALAKANGVSLIFCEEDSYLNILHAKEVLDNNPEIIDSVNEKLKKYQLVYEKGVEVVYLNEWVNEFLAWELKSPFDAFLGAEFSRIKPSDHFFNKIHLKAPHFLESFQNYAPLLEVNEVSGLLQCAHLRYLGIDLGADFLIVHSLGLFHAFENLSLKASKIYKRDNDNTPTLFLPQIALMAMGEKNKQTLGLDAHYHKVTFI |
3KWL Chain:A ((2-495)) | -SVLKLHVKVFRFETNKDYNPAYESYFLEYQEDQYLLDLLKQLKGVSYSENIALKINQIAVFEDAKVSDLVAFFSKEWVLDPLSKRYALKDLMIDEKAVLKNYEDFFKQVPYITKGEKEELEKFIQINFINPQTNPKYLGDGFFLYVKWLMKRYPTERDRLLEMISQPESGVMNFLSVAHYLYKNDDNIDHEIYELQEILTNSKIKPWKDFSKNLLSLFQYHSNPPKTPNPPKTCALFNAYAKHLDVQSLLKSAKLYLEKMGQKTIDLPFCYDGGYYGKIISTHDFLTASAYNLALAKANGVSLIFCEEDAYLNILHAKEVLDNNPEIINSVNEKLKKYQLVYEKDIEIVYLNEWVNEFLAWELKSPFDAFVGAEFSRIKQSDHFFNKIHLKAPHFLESFQNYAPLLEVNEASGLLQCAHLRYLGIDLGADFLIAHSLGLFYAFENLSLKASKIYKRDNDNTPTLFLPQIALMAMGEKNKQDLGLDTHYHKVTFI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KWL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42549 for 3980 contacts (-10.7/contact) +
2D Compatibility (PS) -48237 + (NN) 9729 + (LL) 208
1D Compatibility (HY) 4000 + (ID) 5650
Total energy: -82499.0 ( -20.73 by residue)
QMean score : 0.184
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