Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPSNALSVGEIAHLINVSHSSVHNWIKTNLLEKLEIDHKIYVKTSSFLDFCRNHLGKNKLNRYANKSLKSAHNHQELILKYLEMLENSSDLENLGSYYEKELSNTTRNLEGIYYTPNRIVEQLFTLPKDFDTTQAIFCDPAVGSGNFVMHALKLGFKVENIYGYDTDAFAVALTKKRIKERYRLDCPNIMQ---KDFLSLKHAPQFDCIFTNPPWG-----KKYN----QNQKENFKQQFNLHQS-LDSASLFFMASLNCLKENAYLGLLLPESCLNIDAFSKMREMALKFQMRSLIDFDKPFKNLMTKAVGLALKKTHNKDQKISCF-YQNSEFKRSPSSFFNNP---KKIFNIHCSHQK-----NKILDHLFSL----------PHITLKNNAHFAL-GIVTGNNKEKLHPKQEKNTIPIFRGSDILKDRLKAPSQFINADLKDCQQVAPLSLYQAREKIVYKFISSKLVFFYDNKQRLFLNSANMFVLKENFPINAHALKELLNSDLMQFIFESLFK---THKILRKDLECLPLFAQFINNSFDEKFYLKNLGIEKKDPKHFTIRKNHACCLSFGFRG |
2JG3 Chain:A ((23-409)) | ------------------------------------------------------------------------------------------------------------------TPPEVVDFMVSLAEAPRGGRVL--EPACAHGPFLRAFREAHGTAYRFVGVEIDPKA-------------LDLPPWAEGILADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLGEVFPQKKVSAVVIRFQKS---GKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPLGDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKN----HSGLWMPKERAK--------ELRD--------FYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLLP-KEGVRLDPSSLVQWLNSEAMQKHVRTLYRDFVPHLTLRM-LERLPVRREYGFHTS----------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -144535 for 2703 contacts (-53.5/contact) +
2D Compatibility (PS) -36665 + (NN) -3666 + (LL) 12560
1D Compatibility (HY) -20000 + (ID) 4350
Total energy: -196656.0 ( -72.75 by residue)
QMean score : 0.396
|
|
|