Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYKVADIFCGAGGLSYGFSTHPYF-ELIWANDIDKDAILSYQANHKETQTILCDIAQLHCH------------N-LPRVPIDILLGGPPCQSYSTLGKR-K---MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKF--YFPKPIK------------------------------THFSLKDALGDLPPIQSGENGDALGYLKNADNVFLEFVRNSK---ELSEHSSPKNNEKLIKIMQTLKD--GQSKDDLPES------------LRP-------------------------------------------------KSGYINTYAKMWWEKPAPTITRNFSTPS-SSRCIHPRDSRALSIREGARLQSFPDNYKFYGSANAKRLQIGNAVPPLLSAALAHAVFDFLRGKNV
3SWR Chain:A ((540-1001))KLRTLDVFSGCGGLSEGFHQ-AGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP---GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKLCMLAKA-


General information:
TITO was launched using:
RESULT:

Template: 3SWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131180 for 2951 contacts (-44.5/contact) +
2D Compatibility (PS) -37014 + (NN) -18708 + (LL) 132
1D Compatibility (HY) -20800 + (ID) 4750
Total energy: -212320.0 ( -71.95 by residue)
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_3SWR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SWR-query.scw
PDB file : Tito_Scwrl_3SWR.pdb: