Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGCSFIFKKVRVYSKMLVALGLSSVLIGCAMNPSAETKKPNDAKNQQPVQTHERMTTSSEHVTPLDFNYPVHIVQAPQNHHVVGILMPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQVLRFQDEKALNVQDKKKIFSVLDLKGWVGILEDLKMNLKDPNSPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAITYTYTSTNNASGGFNSSKSVIHENLDKNREDAIHKILNRMYAVVMKKAVTELTKENIAKYRDAIDRMKGFKSSMPQKK
2I9I Chain:A ((51-271))
----------------------------------------------------ERMKTSSEHVTPLDFNYPIHIVQAPQNHHVVGILTPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQVLRFQDEKALNAQDKRKIFSVLDLKGWVGILEDLKMNLKDPNNPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAMTYTYKH--NNSGGLNSSNSIIHEYLEKNKEDAIHKILNRMYAVVMKKAVTELTKENIDKYREAIDRMKGFK-------
General information:
TITO was launched using:
RESULT:
Template:
2I9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107947 for 1628 contacts (-66.3/contact) +
2D Compatibility (PS) -23935 + (NN) -11850 + (LL) 3676
1D Compatibility (HY) -29600 + (ID) 10150
Total energy: -179806.0 ( -110.45 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_2I9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I9I-query.scw
PDB file :
Tito_Scwrl_2I9I.pdb
: