Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGKFSKLGFILATLGSSIGLGHIWRFPYMVGHNGGSAFVLLYLALTLSLGIAMLLVEMLIGNLGKKDVVSNYQILDPKRKKYYPFTSFFILG---GPLILSFYAVVLGWVLYYLF-VVTFDLPKDLEQAKMQFSMLQNGSLIWPVIGFSACLLPTIWFVSRGIEKGIEKLNVVLMPLLFVIFIGLLIYAMTLESMPKALRFLFNFEIQKI-DFKVVMDALGQMFFSLSLGVGTIITYSAFTPKKENLLKSSLFIVLPGILISLIAGVMIFTFVFEYHADVSQGPGLVFISLPLTFAKMGISGQIVSLFFFMALVFAGITSTVSLIEPLALYLINRFNFSRLKASLWIGVVVYVLGVLVILSMNERYAKFLSFAHKSVFGWLDFITSSFLMPLGGLFSVLFIGWILNKKRSFLATKHFFSANAFKAWHFSVRFIAPVVILAIFILQFK |
4US3 Chain:A ((16-450)) | ----SRLGFILAAMGSAVGLGNIWRFSYVTGENGGAAFLLVYLGFIALIGIPIVLAEFTIGRRAQSDAVGSFEKLAPGK----PWKVAGLMGVAAGFLILSFYGVIAGWILFYLFNYITGQLWSAPAEGFGGFFEGFIANPTLPLFWQALFMIATIWIVAIGVKKGIERSNKILMPLLGVLLIALAIYSLTLGGAKEGLAFLFSPDWSALKDPGVYLAAISQAFFTLSLGMGALITYGSYVSKDSRLPGAAVSVAGLDTAFAIIAGIMIFPAVFALGLSPSGGPGLVFVVLPDIFDSIRL-GPIVGIAFFILLGAAALSSAVSLLEVPVAYFMRKFDWSRKQAAITLGVIITLLGIPSSLSFGV-LGEVTIIPGLNIFDSVDFIASSVFLPLGGMIIALFIGWGW-KTSDALAESDLTDSVWGKLWILSLRFIAPIAILIVFLSAF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4US3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -557965 for 3992 contacts (-139.8/contact) +
2D Compatibility (PS) -44001 + (NN) -16342 + (LL) 600
1D Compatibility (HY) -48000 + (ID) 8450
Total energy: -674158.0 ( -168.88 by residue)
QMean score : 0.392
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