Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRTPKHLTKQESVNLGAYYTPPYLVDCAYKLLKKHVGIENYTLLDTACGNKEFLKLHH------------------PKKIGADIDPKCDALIINALAN-----PKR---ENYGIS------QDEPLIIVGNPPYNDRTSFIKQDIKNKDFIFEIDNDLKSRDLGISFL-KSFAILK-------PAF-ICVLHPLSYLIKEANFKQLK-LFKDHYRLLDAFVVSSKSFTK-SNEFPIVIALYERGRMDYAGIRRFVFPTDCDTTLCLNDFDYIANYVDKYPNAKKVGACVGYFFPMRDINALKRNKTFLNAPSENAVRISQDKLIYYQYIHYFKEIAPKIPYYFGNLDIIIDHFAFLEIKDAFLKDKRARLEYFKKLFQGHPCEFD |
| 3UFB Chain:A ((193-416)) | ------------AGDSGEFYTPRPVVRFMVEVMDPQ---LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKG-ILG---NF----PEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNFNLHTIVRLPEGVFAPYTDI-AGNLLFFDRSGPTDDIWYYQITVPEGRKKYTKTKPMESHEFDECLNWWSNRIVNQNAWKESASEIIKYSESGQLIDVNLDRKNPNSLEVLEH----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69859 for 1386 contacts (-50.4/contact) +
2D Compatibility (PS) -19368 + (NN) -9587 + (LL) 5420
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -102294.0 ( -73.81 by residue)
QMean score : 0.420
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