Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTKAGFVALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPGLHHQEK-LLNQCMLSQALKAMGDAELRVFLASVHDDLKGYEEFLSLCQK---PHILALSKIDTATHKQVLQKLQEYQKYSSQFLALVPLSAKKSQNLNALLECISKHLSPSAWLFEKDLMSDEKMRDIYKEIIRESLFDFLSDEIPYESDVMIDKFIEEERID-KVYARIIVEKESQKKIVIGKNGVNIKRIGTNARLKMQEVGEKKVFLNLQVIAQKSWSKEEKSLQKLGYIYQRNRD
3IEU Chain:A ((5-296))-KSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRH---RIVGIHTEGAY--QAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLG--------


General information:
TITO was launched using:
RESULT:

Template: 3IEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145409 for 2129 contacts (-68.3/contact) +
2D Compatibility (PS) -30525 + (NN) -4379 + (LL) 1284
1D Compatibility (HY) -21600 + (ID) 5600
Total energy: -206229.0 ( -96.87 by residue)
QMean score : 0.363

(partial model without unconserved sides chains):
PDB file : Tito_3IEU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IEU-query.scw
PDB file : Tito_Scwrl_3IEU.pdb: