Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADTINTTETTHETKKPNAFVNFFKNNLTDKRYDSLGLIGAGVLCCVLSGAMGIVGIIFVAIGIFLSFSNINLVKLVEKLSKKQPKAATTVNNETQKSQAASVTNEPTEAKETKD
1O54 Chain:A ((121-141))
--------------------------------------VGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDVPDPWNYID
General information:
TITO was launched using:
RESULT:
Template:
1O54.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12282 for 85 contacts (-144.5/contact) +
2D Compatibility (PS) -2029 + (NN) 814 + (LL) 1912
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -13235.0 ( -155.71 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_1O54.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O54-query.scw
PDB file :
Tito_Scwrl_1O54.pdb
: