Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MELGFNEAERQKILDSNSSLI-RNANEVRDKFIQNYAISLKDSNDPQDFLRRVQELRINMQKNFISFDTYYNYLNNLVLASYNRCKQEKTFAESTIKNELTLGEFVAEISDNFNNFMCDEVARISDLVASYLPREYLPPFIDGNMMGVAFQILGIDDFGRKLNEIVQDIGTKYIILSKNKTYLTSLERAKLITQLKLNLE
1S2X Chain:A ((7-186))
VDELGFNEAERQKILDSNSSL-MRNANEVRDKFIQNYATSLKDSNDPQDFLRRVQELRINMQKNFISFDAYYNYLNNLVLASYNRCKQEKTFAESTIKNELTLGEFVAEISDNFNNFTCDEVARISDLVASYLPREYLPPFIDGNMMGVAFQILGIDDFGKKLNEIVQDIGTKYIILSKNK--------------------
General information:
TITO was launched using:
RESULT:
Template:
1S2X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97031 for 1249 contacts (-77.7/contact) +
2D Compatibility (PS) -18936 + (NN) -5681 + (LL) 2304
1D Compatibility (HY) -24400 + (ID) 8650
Total energy: -152394.0 ( -122.01 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_1S2X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S2X-query.scw
PDB file :
Tito_Scwrl_1S2X.pdb
: