Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINNNNNNKKLRGFFLKVLLSLVVFSSYGSANDDKEAKKEALEKEKNTPNGLVYTNLDFDSFKATIKNLKDKKVTFKEVNPDIIKDEVFDFVIVNRVLKKIKDLKHYDPVIEKIFDEKGKEMGLNVELQINPEVKDFFTFKSISTTNKQRCFLSLHGETREILCDDKLYNVLLAVFNSYDPNDLLKHISTIESLKKIFYTITCEAVYL
3CWY Chain:A ((47-176))
-----------------------------------------------------------------------------EVNPDIIKDEVFDFVIVNRVLKKIKDLKHYDPMIEKIFDEKGKEMGLNVEIQINPEVKDFFTFKSISTTNKQRCFLSLRGETREILCDNKLYNMLLAVFNSYDPNDLLKHISTVESLKKIFYTITCEAVY-
General information:
TITO was launched using:
RESULT:
Template:
3CWY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88830 for 870 contacts (-102.1/contact) +
2D Compatibility (PS) -13700 + (NN) -4075 + (LL) 4452
1D Compatibility (HY) -22000 + (ID) 6200
Total energy: -130353.0 ( -149.83 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_3CWY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CWY-query.scw
PDB file :
Tito_Scwrl_3CWY.pdb
: