Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELGNKNIKPGRKRVAVDELKRNFSVTFYLSKEEHDVLRRLADEEVESVNSFVKRHILKTIIYKKGTNQDSSINCDSSSRL
2K1O Chain:A ((21-74))
--------------------KRNFSVTFYLSKEEHDVLRRLADEEVESVNSFVKRHILKTIIYKKGTNQDSSIN-------
General information:
TITO was launched using:
RESULT:
Template:
2K1O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9532 for 228 contacts (-41.8/contact) +
2D Compatibility (PS) -5785 + (NN) -2452 + (LL) 1344
1D Compatibility (HY) -7200 + (ID) 2700
Total energy: -26325.0 ( -115.46 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_2K1O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K1O-query.scw
PDB file :
Tito_Scwrl_2K1O.pdb
: