Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAQLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEIIFPYAKEGEIDFMLSVAQISYNQFKSDIKKGGIVVIDPNLVTPTKEDEEKYQLYKIPIISIAKDEVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVPAKVAETNKKAFEIGKKHALEALKK
3G2E Chain:C ((3-183))
LKYQLRFGGEG---VITAGEILAEAAIKEGRQAFKASTYTSQVRGGPTKVDIIIDDKEILFPYAVEGEVDFMLSTADKGYKGFRGGVKEGGIIVVEPNLVHPESEDYKKWQIFEIPIITIAKDEVGNVATQSVVALAIAAYMSKCIDLDVLKETMLHMVPAKTRDANAKAFDLGVKYATQAKPH
General information:
TITO was launched using:
RESULT:
Template:
3G2E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103194 for 1537 contacts (-67.1/contact) +
2D Compatibility (PS) -19137 + (NN) -9453 + (LL) -224
1D Compatibility (HY) -17200 + (ID) 5200
Total energy: -154408.0 ( -100.46 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_3G2E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G2E-query.scw
PDB file :
Tito_Scwrl_3G2E.pdb
: