Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTIKSIPIRTFILLYKSSPKCVVLASITVLFVG-ILPSLNILV--MIKLIDIVVNLLQKHTHFEYSLLLPTLLLWGALLFLTHVFSGILSSLQTIIAEQFSINIITQLANKLTQVKNLNFFENKDHTIKLNTIHNGLHIRPLNY--VSNLFFNL-QRIIGLI-------SLFGILFSISIYLPFIMIFATVPCILISNHIAKKHSASIDKLQDQKESMQNYLYSGLDNQKNKDNLLFNFMLNFHHKFIETKELYLNNFVKVAQKNLIFTIYA------DVLITTLSIALFFLMV--FIILSKLIGVGAIAGYIQAFSSTQQQLQDLSFYGKWFFAINKYFENYFCILDYKIPKPETQIKLEEKI--HSITFENISFSYPNSK--LIFENFNLSLHSNKIYALVGKNASGKSTLINLLLGFY--TPNSGQIIINNKYPLQDLELNSYHQQMSAIFQDFSLYAGYSIDDNLFMQNNITKEQLKQKREILKSFDENFQNCLNDCNNTLFGAQYNGVDFSLGQKQRIATMRAFLKPSNCIVLDEPSSAIDPIME---KEFLDFIFKKSQSKMALIITHRMNSVKQANEIIVLDQGKLIEQGNFETLMK--KQGLFCELFLKQQY |
| 3WMG Chain:A ((16-595)) | ---------RIFALAWSSSATMIVIGFIASILEGATLPAFAIVFGRMFQVFTKSKSQIEGET-WKYSVGFVGI---GVFEF---IVAGSRTALFGIASERLARDLRVAAFSNLVE-QDVTYFDRRKAGELGGKLNNDVQVIQYSFSKLGAVLFNLAQCVVGIIVAFIFAPALTGVLIALS---PLVVLAVVVQMIEMSGNTKRSSEAYASAGSVAAEVFSNIRTTKAFEAERYETQRYGSKLDPLYRLGRRRYISDGLFFGLSML-VIFCVYALALWWGGQLIARGSLNLGNLLTAFFSAILGFMGVG------QAAQVWPDVTRGLGAGGELFAMIDR-------VPQYRRPDPGAEVVTQPLVLKQGIVFENVHFRYPTRMNVEVLRGISLTIPNGKTVAIVGGSGAGKSTIIQLLMRFYDIEPQGGGLLLFDGTPAWNYDFHALRSQIGLVSQEPVLFSGTIRDNILYGKRDATDEEVIQALREANAY--SFVMALPDGLDTEVGER--GLALSGGQKQRIAIARAILKHPTLLCLDESTSALDAESEALVQEALDRMM-ASDGVTSVVIAHRLSTVARADLILVMQDGVVVEQGNHSELMALGPSGFYYQLVEKQLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253175 for 3939 contacts (-64.3/contact) +
2D Compatibility (PS) -57739 + (NN) -27511 + (LL) 3348
1D Compatibility (HY) -36000 + (ID) 7250
Total energy: -378327.0 ( -96.05 by residue)
QMean score : 0.317
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