Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEIL-GVDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGVYKQ-LNYVYDTISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLEFSWDYLKKISKELKKRY--AHIPVILFPKGIGAYLDSI-DGEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLY-DKNALEEGVEKILKVMG-NQGHIFNLGHGMLPDLPRENAKYLVQLVHAKTRR |
| 4WSH Chain:B ((17-355)) | --FLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPLDRYPQLDAAILFSDILTIPDAMGQGLY------PRFRKVVSSLADIEALPVPDPEQDLGYVMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHALLDKLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGRRVPVILFTKGGGLWLESMAEVGAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYANPAAIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHAGAFFEAVHELSAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250686 for 2911 contacts (-86.1/contact) +
2D Compatibility (PS) -35287 + (NN) -12883 + (LL) 564
1D Compatibility (HY) -32000 + (ID) 7550
Total energy: -337842.0 ( -116.06 by residue)
QMean score : 0.601
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