Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVRDIDKTTSLHLNNEAQFLCFRLDAEKDAQLYGMNIFKIREIIHYDGEVTEILGGSDGVMLGFLSVRGESIPLVDVKRWLHYNANDPSRDLKECSVKDDHNLVIVCHFSNHSIALKVLKIERIIHKNWTEISAGDKQGINEEGKLSAITRFDEQRVVQILDVEKMISDVFPSLKDLDDLTLRCIEAIQSQKLILIAEDSLSALKTLEKIVQTLELRYLAFPNGRELLDYLYEKEHYQQVGVVITDLEMPVISGFEVLKTIKADSRTEHLPVIINSSMSSDSNRQLAQSLEADGFVVKS-NILEIHEMLKKTLS |
1W25 Chain:A ((2-116)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAAR----DLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1W25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -73898 for 878 contacts (-84.2/contact) +
2D Compatibility (PS) -12485 + (NN) -7638 + (LL) 14264
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -86507.0 ( -98.53 by residue)
QMean score : 0.591
|
|
|