Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLETPKVLLKNLQDCKIHFIGIGGIGISGLAKYLKAQGAKISGSDIAISPSVKYLKALGVEINIPHDPKAINHQDVIIHSAIIKEDNTEIQRAKELEIPILSRKDALYSILKDKRVFSVCGAHGKSSITAMLSAIC------PAFGAIIGAHSKEFDSNVRESADMSLVFEADESDSSFLFSNPFCAIVPNTEPEHLEHYDHDLERFFFAYKYFLDHAQ---KRVIYKEDPFL----KNYSKDAIVL---EKKDIYNIQYILKDG--EPYTSFELKNLGAFLVWGL-GEHNATNASLAILSALDE-LNLEEIRNNLLNFKGIKKRFD-----ILQKNNLILIDDYAHHPTEIGATLKSARIYANLLNTQEKIIVIWQAHKYSRLMDNLEEFKKCFLEHCDRLIILPVYSASEVK-RDIDLKA------HFKHYNPTFIDRVRKKGDFLELLVNDNVVETIEKGFVIGFGAGDITYQLRGEM |
1P3D Chain:A ((11-468)) | ------IIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSAIKDDNPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTF--VNGGLVKSAGKNAHLGASRYLIAEADESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKVGRQVITYGFSEQAD-YRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWG----DKRIVMIFQPHRYSRTRDLFDDFVQV-LSQVDALIMLDVYAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDG-------DLILAQGAGSVSKISRGLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217228 for 3783 contacts (-57.4/contact) +
2D Compatibility (PS) -45659 + (NN) -9284 + (LL) 2008
1D Compatibility (HY) -23600 + (ID) 7650
Total energy: -301413.0 ( -79.68 by residue)
QMean score : 0.484
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