Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKATQSTINDFFALTGTIFSIPVYQRNYTWEEENCEKLLQDIVNISQNKKTHFMGSITYILHLIDDEKSLRQLQEFVIIDGQQRITTIMLLLKAIETKIQNEGIKKEIDGLLNLSGQRLRLKPIKSDKEAFDLVMQNRSHEIQGVSHIKNNYKFFTKELDNYISKGYRIEEIYGAFLWLKIVAIGLELGEDDPQVVFESINATGVQLKGLDLIRNYLMMGENSDNQNRLYNTYWVPLENWLGEKDLNDFIKTYLRIYFEDRVKEGEREVYYALKAHHRDNFPNNIQGLMSDMREYGRIFQIFLDRDHYFLHRGDPQQLANLRLRVKDLVKIKFGVAKPFVLRCARDFEEGKLDYENFHEILQILISYFVRRSVCGDSTPTLTRVLYSLYRQLGEDVSADALKRYLGKSVGQMAFPNDDKIKAAFLVRNAYAANQVCKFILLEIEKLSNAEPPKEENLEVEHFYPKTPTQEWRDRVGDYFTFEQDYLNNFGNLTLSGQNQRLGNKSYEAKIALMEEYSSLHLNDYFTNNTDSWGIEEVRARSEYLADQFCQVGLFKDLPKEYRARELHKTLDDNLTNHNLQSVKLPNDQRRMAGNAKELASVVIDYLLENAREAFESYTDDESQKYIYWSKAKAEARDRDGTLVVPFEKYGFYFVSNASYQTTGSNLKDLILGCNLNPRDFVVE |
| 3SK7 Chain:A ((88-169)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FMLILSTLHRIDSASFSEATMF--RVYFADNEQTLLASGQT-TKPKAIPNTPFWVITNNNTSRKQQMVEQVMVRMGFPSDIIEKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43747 for 521 contacts (-84.0/contact) +
2D Compatibility (PS) -8420 + (NN) -4399 + (LL) 42160
1D Compatibility (HY) -3200 + (ID) 400
Total energy: -18006.0 ( -34.56 by residue)
QMean score : 0.522
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