Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQKILILGIGNILFGDEGIGVHLAHYLKRNFSFFPSVDIVDGGTMAQQLIPLITSYEKVLILDCVSAKGVEIGSVYAFDFKDAPKEITWAGSAHEVEMLHTLRLTEFLGDLPKTF-IVGLVPFVIGSETTFKLSSEMLNALETALKAIETQLNAWGVK-MQRTDHIALDCIAELSYKGF
1CFZ Chain:A ((2-161))
---RILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTAGMELLGDMANRDHLIIADAIVSKKNAPGTMMILRDEEVPALFTNKISPHQLGLADVLSALRFTGEFPKKLTLVGVIPESL--EPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPRSDS--------------
General information:
TITO was launched using:
RESULT:
Template:
1CFZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130410 for 1266 contacts (-103.0/contact) +
2D Compatibility (PS) -17430 + (NN) -9240 + (LL) 1232
1D Compatibility (HY) -12000 + (ID) 2350
Total energy: -170198.0 ( -134.44 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_1CFZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CFZ-query.scw
PDB file :
Tito_Scwrl_1CFZ.pdb
: