Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIGWIGLGAMGTPMATRLRDAGLEVSVYNRTESKAAPLKEKGVAVYTSPIDLAAKVDLVFTMLSDKAAIDAVLAPK--FWEQM-SKKIVVNMSTIAPLESLSLEKIAQKHQATYLEAPVSGSVGAAKAGALLILAAGDEEVISKLKPVLAHLGSQTFYLGKVGQGTGAKLSINSLLAQMGVAYSEALLLAKRLGVDAESFLQIIGQSGMNSPLFQAKKG-MWLQDNYPAAFSLKLMAKDIRLAKNEAGEA-MKLPFLFQAEELYSQAEKSGLGGLDMAAVYHYLEKGEH |
3DOJ Chain:A ((22-308)) | MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAMTNPMFKGKGPSMN-KSSYPPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFKKARSLGLGDLDFSAVIEAVKFSR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184762 for 2476 contacts (-74.6/contact) +
2D Compatibility (PS) -30952 + (NN) -13497 + (LL) 280
1D Compatibility (HY) -24400 + (ID) 5250
Total energy: -258581.0 ( -104.43 by residue)
QMean score : 0.535
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