Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFFILFFMGMLGVGFSQTELDLKDLEKKPAGIVRDYYLWRYISDKKTSLENAKKAYELTQNKNSALQKAMQEKGVENSDKSPDAKMPEDIYCKQITLESMLETTDAFQASCIAIALKSKIRDFDKIPIQTFKPLQEKIKEAYPILYEELEILQSKNVSASLFKANAQVFSALFNHLSYEKKLQIFEKHIPIKELNRLLDEDYPAFNRLIYQVILDPKLDHFKDALAKSNATQSNAQTFFILGINEILHKKTSKALKYFERSEAVVKDDDFSKDRAIFWQYLAS---K----KKKTLEHLSQSPALNLYSLYASRKLKTTPSYRIISHIQNLSQEN---PPFN-T------YD----PFSWQIFKEKTLSLKDEGAFNAMLKSLYYEKSA---PELTYLLSQRNKDKIYYYLSPYEGIIEWQNTD---ERAMAYAIARQESFLLPALISRSFALGLMQIMPFNVGPFAKSLGMD-NVDLNDMFNPNIALKFGNYYLNHLKKEFN-HPLFVAYAYNAGPGFLRRWLESSKRFKGKNHFEPWLSMELMPYSETRMYGFRVMLNYLIYQEIFGNFIPIDAFLEQTLNSKDKP |
| 1QSA Chain:A ((284-605)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STSLIERRVRMALGTGDRRGLNTWLARLPMEAK----EKDEWRYWQADLLLERGREAEAKEILHQLMQ--QRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSK---SK-TEQAQLAR-YAFNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSA-----GRIDAVAFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142359 for 2308 contacts (-61.7/contact) +
2D Compatibility (PS) -30473 + (NN) -7539 + (LL) 18976
1D Compatibility (HY) -5200 + (ID) 3200
Total energy: -169795.0 ( -73.57 by residue)
QMean score : 0.461
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