Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKTISGGENFTTNNRMELRALNEALKILKRPCHITLYSDSQYVCQAINVWLVNWQKKNF-----AKVKNVDLWKEFVKVSKGHSIVAVWIKGHNGHAENERCNSLAKLEAQKRVKTTT
1WSE Chain:B ((2-141))
LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDT
General information:
TITO was launched using:
RESULT:
Template:
1WSE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54726 for 1085 contacts (-50.4/contact) +
2D Compatibility (PS) -14156 + (NN) -5654 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 3600
Total energy: -86536.0 ( -79.76 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_1WSE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WSE-query.scw
PDB file :
Tito_Scwrl_1WSE.pdb
: