Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRILVSLAVLSHSAHAVKTHNLERVEASGVANDKEAPLSWRSKEVRNYMGSRTVISNKQLTKSANQSIEEALQNVPGVHIRNSTGIGA---VPSISIRGFGAGGPGHSNTGMILVNGIPIYVAPYVEIGTVIFPVTFQSVDRISVTKGGESVRYGPNAFGGVINIITKGIPTNWESQVSERTTFWGKSENGGFFNQNSKNIDKSLVNNMLFNTYLRTGGMMNKHFGIQAQVNWLKGQGFRYNSPTDIQNYMLDSLYQINDSNKITAFFQYYSYFLTDPGSLGIAAYNQNRFQNNRPNNDKSGRAKRWGAVYQNFFGDTDRVGGDFTFSYYGHDMSRDFKFDSNYLNVNTNPKLGPVYTNQNYPGFFIFDHLRRYVMNAFEPNLNLVVNTNKVKQTFNVGMRFMTMDMFIRSDQSTCEKTDIINGVCHMPPYVLSKTPNNNQEMFNNYTAVWLSDKIEFFDSKLVITPGLRYTFLNYNNKEPEKHDFSVWTSKKQRQNEWSPALNIGYKPMENWIWYANYRRSFIPPQHTMVGIT---RTNYNQIFNEIEVGQRYSYKNLLSFNTNYFVIFAKRYYAGG----YSPQPVDARSQGVELELYYAPI------RGLQFHVAYTYIDARITSNADDIAYYFTGIVNKPFDIKGKRLPYVSPNQFIFDMMYTYKHTTFGISSYFYSRAYSSMLNQAKDQTVCLPLNPEYTGGLKYGCNSVGLLPLYFVLNVQVSSILWQSGRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSITAYLNYEF |
| 1KMO Chain:A ((114-774)) | ------------------------ALTVVGDWL-----GDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGSHDLAMNFGIRGLNPRL---ASRSTVLMDGIPVPFAPYGQPQLSLAPVSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQLSP----TSSQN------------NPKETHNLMVGGTADNGFGTALLYSGTRGSDWREHSATRIDDLMLKSKYAPDEVHTFNSLLQYYDGEADMPGGLSRADYDADRWQSTRPYDRFWGRRKLASLGYQFQPDS----QHKFNIQGFYTQTLRSG-----YLE--Q----GKRIT----------LSPRNYWVRGIEPRYSQIFMIGPSAHEVGVGYRYLNESTHEMRYYTATSS-----G--QLPSGSS--PYDRDTRSGTEAHAWYLDDKIDI-G-NWTITPGMRFEHIESYQNNAIT-----GTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAVQSGNVEPEKARTWELGTRYDD-GALTAEMGLFLINFNNQYDSNQTNDTVTARGKTRHTGLETQARYDLGTLTPTLDNVSIYASYAYVNAEIREKG---------------DTYGNLVPFSPKHKGTLGVDYKPGNWTFNLNSDFQSSQFADNANTVKE----------------SADGSTGRIPGFMLWGARVAYDFGP-QMADLNLAFGVKNIFDQDYFIRSYDDNNKGIYAGQPRTLYMQGSLKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52442 for 5870 contacts (-8.9/contact) +
2D Compatibility (PS) -69072 + (NN) -24956 + (LL) 5876
1D Compatibility (HY) -12800 + (ID) 7750
Total energy: -161144.0 ( -27.45 by residue)
QMean score : 0.254
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