Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRSLAFCLLALLGLQVLGARDFSQLKNEELLKLAGTLPSNEAIDYRMEVSKRLKALSAEDAKKFRANFSRIARKNLSKMSEEDFKKMREEVRKELEEKTKGLSAEEIKAKGLNVSVCSGDTRKVWCRAVKKKDEHCSPK
2XRH Chain:A ((4-99))
---------------PFTMAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGN----MEDMD-DDFGLRS-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2XRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3788 for 608 contacts (-6.2/contact) +
2D Compatibility (PS) -10569 + (NN) -6928 + (LL) 3104
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -25081.0 ( -41.25 by residue)
QMean score : 0.704
(partial model without unconserved sides chains):
PDB file :
Tito_2XRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XRH-query.scw
PDB file :
Tito_Scwrl_2XRH.pdb
: