Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKALKILSVGALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAIKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH
2XRH Chain:A ((4-100))
---------------PFTMAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNMEDMDDDFGLRS----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5215 for 618 contacts (-8.4/contact) +
2D Compatibility (PS) -10767 + (NN) -8383 + (LL) 1872
1D Compatibility (HY) -8400 + (ID) 4600
Total energy: -35493.0 ( -57.43 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_2XRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XRH-query.scw
PDB file :
Tito_Scwrl_2XRH.pdb
: