Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQYANAYQAYQHNRVSVESPAKLIEMLYEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYEKGGKVAVYLTGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREIHSDELA
3IQC Chain:A ((3-126))
--YANAYQAYQH-----ESPAKLIEMLYEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYEKGGEVAVYLTGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREIHSDELA
General information:
TITO was launched using:
RESULT:
Template:
3IQC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76744 for 847 contacts (-90.6/contact) +
2D Compatibility (PS) -12718 + (NN) -5129 + (LL) 704
1D Compatibility (HY) -18400 + (ID) 5900
Total energy: -118187.0 ( -139.54 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_3IQC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IQC-query.scw
PDB file :
Tito_Scwrl_3IQC.pdb
: