Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKRKRPQSGKIDRVDC---------LEKLGKENT-TFLSSIAMGSIGQLAIPIP-----GVG-VLIGGFVGGVMSKTFYDVSLTIFKEAKLARQRRIEIEKECRESIRQLEMYQNQFNEVFERYFHGTIKFFNESFDELERALCAGDADLAIAVNNKIQEGMGQELLFDNKQECWEFITSRKEGWNFITSRGKTEI |
| 1FDU Chain:A ((72-154)) | VAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGVLDRTDIHTFHRFYQYLALSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FDU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10967 for 304 contacts (-36.1/contact) +
2D Compatibility (PS) -7061 + (NN) -678 + (LL) 0
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -25956.0 ( -85.38 by residue)
QMean score : 0.119
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