Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVDSFNRVIDYIRVSVTKQCNFRCQYCMPTTPLDF----FDDEELLPLDNVLEFLKIAIDEGVKKIRITGGEPLLRKGLDEFIAKLHAYNKEVALVLSTNGFSLKKMAKGLKDAGLSRVNVSLDSLKSDRVLKISQ-KDALKNTLEGIEESLKVGLKLKLNTVVMKGVNDDEILELLEYAKNRSIQIRYIEFMENTHAKSL--VKGLKEKEILDLIAQKYKIMGME-KPKQGSSKIYTLEN-GYQFGIIAPHSDDFCQSCNRIRLASDGKICPCLYYQ-DAIDAKEAIINKD-TKMMKRLLKQSIINKPEKNMWNDKN----G-GTPTRAFYYTGG |
| 1TV8 Chain:A ((4-329)) | QIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQ----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140927 for 2450 contacts (-57.5/contact) +
2D Compatibility (PS) -34238 + (NN) -25103 + (LL) 232
1D Compatibility (HY) -26000 + (ID) 5900
Total energy: -231936.0 ( -94.67 by residue)
QMean score : 0.502
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