Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEVRFFGPIKEENFFIKANGLKELRAILQEKEGLKEWLGVCAIALNDHLIDNLDMPLKDGDVISLLPPVCGG
3RPF Chain:C ((2-74))
MVEVRFFGPIKEENFFIKANDLKELRAILQEKEGLKEWLGVCAIALNDHLIDNLNTPLKDGDVISLLPPVCGG
General information:
TITO was launched using:
RESULT:
Template:
3RPF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53196 for 443 contacts (-120.1/contact) +
2D Compatibility (PS) -8109 + (NN) -2683 + (LL) 0
1D Compatibility (HY) -11600 + (ID) 3500
Total energy: -79088.0 ( -178.53 by residue)
QMean score : 0.728
(partial model without unconserved sides chains):
PDB file :
Tito_3RPF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RPF-query.scw
PDB file :
Tito_Scwrl_3RPF.pdb
: