Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRLEVSNQAKLPTQFGEFCIQCFREKGSNGSKDHLVIFTPNFPQNPLVRLHSECLTGDALGSQKCDCGGALQMALERISKEGGLVIYLRQEGRGIGLFNKVNAYALQDKGYDTIQANEMIGFKDDERDYSIAGEILEYYRIKKMRLLTNNPLKIAALEKYAEVTRESLIVCANEHNQGYLEVKKLKMGHLL
4RL4 Chain:A ((21-193))
MKRLEVSNQAKLPTQFGEFYIQCFREK---GSKDHLVVFTPNFSQNPLVRLHSECLTGDALGSQKCDCGGALQMALERISKEGGLVIYLRQEGRGIGLFNKVNAYALQDKGYDTIQANEMIGFKDDERDYSVAGEILEYYRIKKMRLLTNNPKKIAALEKYAEVTRESLIVCA-------------------
General information:
TITO was launched using:
RESULT:
Template:
4RL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94951 for 1261 contacts (-75.3/contact) +
2D Compatibility (PS) -18219 + (NN) -4617 + (LL) 1020
1D Compatibility (HY) -24000 + (ID) 8050
Total energy: -148817.0 ( -118.02 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_4RL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RL4-query.scw
PDB file :
Tito_Scwrl_4RL4.pdb
: