Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKNKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDEEFNPHKQQE
3S0Y Chain:A ((1-189))
----------------------------------------------------------------MQPVVVIPPDSGKEEEQMASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDNEFNPH----
General information:
TITO was launched using:
RESULT:
Template:
3S0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53861 for 1231 contacts (-43.8/contact) +
2D Compatibility (PS) -21352 + (NN) -18290 + (LL) 5768
1D Compatibility (HY) -22800 + (ID) 9150
Total energy: -119685.0 ( -97.23 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_3S0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S0Y-query.scw
PDB file :
Tito_Scwrl_3S0Y.pdb
: