Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKNDDFVIAKNQLGNIVPNSVGVIRAVNGKSAMVLFIGLNELKRVDFSELEAIDIYRTGKGYDKKICNICHILKNTDGFEINQTDAKGRKTTRPSCRECRKNIDGVKLSSTEKKKMDEIAPPKGSVFTCPICEKRSIVGVTANLVHDHNHDTGWGREWICDSCNTGLGRFKDNPKFLEKVIEYLKKYEK
3FC3 Chain:B ((12-199))
-LKNDDFVIAKNQLGNIVPNSVGVIRAVNGKSAMVLFIGLNELKRVDFSELEAIDIYRTGKGYDKKICNICHILKNTDGFEINQTDAKGRKTTRPSCRECRKNIDGVKLSSTEKKKMDEIAPPKGSVFTCPICEKRSIVGVTANLVHDHNHDTGWGREWICDSCNTGLGRFKDNPKFLEKVIEYLKKYE-
General information:
TITO was launched using:
RESULT:
Template:
3FC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48498 for 1260 contacts (-38.5/contact) +
2D Compatibility (PS) -19865 + (NN) -3904 + (LL) 272
1D Compatibility (HY) -25600 + (ID) 9400
Total energy: -106995.0 ( -84.92 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3FC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FC3-query.scw
PDB file :
Tito_Scwrl_3FC3.pdb
: