Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQEEGVREAIAKLDNTDFMGRTIRVTEANPKKS
2KI2 Chain:A ((1-77))
MRNIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQEESVSEAIAKLDNTDFMGRTIRVTEA-----
General information:
TITO was launched using:
RESULT:
Template:
2KI2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29587 for 522 contacts (-56.7/contact) +
2D Compatibility (PS) -7803 + (NN) 86 + (LL) -120
1D Compatibility (HY) -11200 + (ID) 3700
Total energy: -52324.0 ( -100.24 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_2KI2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KI2-query.scw
PDB file :
Tito_Scwrl_2KI2.pdb
: