Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFLVKKIGVVIMILVCFLACSQESFIKMQKKAQEQENDGSKRPSYVDSDYEVFSETIFLQNMVYQPIEERNAFFQLTKDEDNSFNPENSVILLNEPSDNSEKNLLSYPND---PNNNEDNANNSQKNPFLYKPKRKTKNPKLIEYSQQD-FYPLKNGDIIMSKEGDQWLIEIQSKALKRFLKDQNDKDRQIQTFTFNDTKTQIAQ--IKGKISSYVYTTNNGSLSLRPFYESFLLEKKSDNVYTIENKALDTMEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSDTELFLECLKES |
| 4OBM Chain:A ((105-251)) | --------------------------------------------------------------------------------------------LTELFDMVGNTTLTVPSEIKYENKKDNTVTIIKKGTQIFTAEQMYAYLTLPDYGVKDELYPCKLNATVISSFIDQNFIGTSSKTLDEYI-----------NFIINFTNTNIEQSDYDAKVKAIVYTLSQNKSSVTDFYIPY--GDKSGDDYIIDDNSWNSAKKALGTG------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29099 for 809 contacts (36.0/contact) +
2D Compatibility (PS) -13970 + (NN) 3976 + (LL) 11468
1D Compatibility (HY) -9600 + (ID) 1850
Total energy: 19123.0 ( 23.64 by residue)
QMean score : 0.154
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