Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDDLIQKEFLAHKEALEKSLESLQDALKQSVHLLIETLENQGKILICGNGGSASDAQHFAAELTGRYKLERKGLSVISLSTDTSALTAIANDYGYEEVFARQVEALGNKEDILIGISTSGNSKNVLKAYEKAKDLGMKTLSLAGRDGGKMKPLSDIALIVPSGDTPRIQEMHILMIHILCDCIERHFARKN
1TK9 Chain:A ((5-188))
---NLVEKEWQEHQKIVQAS-EILKGQIAKVGELLCECLKKGGKILICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQVEALGNEKDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLVVPSDDTARIQEMHILIIHTLCQIIDESF----
General information:
TITO was launched using:
RESULT:
Template:
1TK9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86057 for 1491 contacts (-57.7/contact) +
2D Compatibility (PS) -20136 + (NN) -16505 + (LL) 892
1D Compatibility (HY) -12000 + (ID) 4300
Total energy: -138106.0 ( -92.63 by residue)
QMean score : 0.649
(partial model without unconserved sides chains):
PDB file :
Tito_1TK9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TK9-query.scw
PDB file :
Tito_Scwrl_1TK9.pdb
: