Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKIQKIHPNALIPKYQTEGSSGFDLHAVEEVVIKPHSVGLVRIGICLSLEVGYELQVRTRSGLA-LNHQVMVLNSPGTVDNDYRGEIKVILANLS-DKDFKVQVGDRIAQGVVQKTYKAEFIECEQLD-----ETSRGSGGFGSTGVSKA
3HZA Chain:A ((24-172))
-TLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRV-GLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGWGSSGGHAS
General information:
TITO was launched using:
RESULT:
Template:
3HZA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70842 for 907 contacts (-78.1/contact) +
2D Compatibility (PS) -14956 + (NN) -622 + (LL) 252
1D Compatibility (HY) -8800 + (ID) 2900
Total energy: -97868.0 ( -107.90 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_3HZA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HZA-query.scw
PDB file :
Tito_Scwrl_3HZA.pdb
: