Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFLRSYPKLRYALCLPLLTETCYSEERTLNKVTTQAKRIFTYNNEFKVTSKELDQRQSNEVKDLFRTNPDVNVGGGSVMGQKIYVRGIEDRLLRVTVDGAAQNGNIYHHQGNTVIDPGMLKSVEVTKGAANASAGPGAIAGVIKMETKGAADFIP-RGKNYAASGAVSFYTNFGDRETFRSAYQSAHFDIIAYYTHQNIFYYRSGATVMKNLFKPTQADKE-PGTPSEQNNALIKMNGYLSDRDTLTFSWNMTRDNATRLLRSNAIGLAYPCEAPFSPDGAQGCPNVLDSFTRYLYHSINSANNLSLQYKREAGNSFGDPRLDFTLYTSIRNAQFDPLFDPNGVYAKFPTSLASAWERENYPCVEGGYCTPSFSDVDKPSSQPRNLFLNNTGLNLKVAHVIDEATDSLFEYGFNYQNLSV-----FDAR--IPKSELYRPNQVYTDDKGQKQIACSLVDNNP------NDPTLCQRGKANGNIYGGYVQANYSPHKI--ITFGAGVRWDAYTLYDKDWNHRYTQGFSPSAALVISPIEPLSLKITYSQVTRGVMPGDGV--YMRQNDLRYAKNIKPEVGSNAEFNIDYSSQYFSGRAAAFYQALDNFISQYAQRLIVTNLSQA-----IRIYGYEVGGTFRYKGVSLNVGISRTWP----TTRGYLMADSYELAASTGNVFIIKLDYTIPKTGINLAWLSRFVTGLDYCGFDIYLPDYGTAEKPKTPTDLA--KCGSQLGLVHMHKPGYGVSNFYINWSPKTKSHWKGLLLSAVFNNVFNKFYVDQTSPYVMSPDMPGTDAIKRAIAEPGFNARFEVAYKW |
| 4AIP Chain:A ((61-742)) | ------------------------------------DRQGSKIRTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQFLTLRGMGQNSVDIKVDNAYSDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLDKNWGVRLNSGFASNNGVSYGASVFGKEGNFDGLFSYNRNDEKDYEAGKG-----FRNVNGGKTVPYSALDKRSYLAKIGTTFGDDD-------------HRIVLSHM------------KDQHRGIRTVREEFTVGDKSSRINIDRQAPAY-RETTQS------NTNLAYTGKNLGFVEKLDAN----------AYVLEKERYSADDSG--TGYAGNVKGPN----HTRITTRGANFNFDSRLAEQT--LLKYGINYRHQEIKPQAFLNSKFSIPT--------------PMEQQMKDRADEDTVHAYKLSNPTKTDTGV--------YIEA---IHDIGDFTLTGGLRYDRFKVKTHDGKTVSSSNLNPSFGVIWQPHEHWSFSASHNYASRSPRLYDALQTHGKRGIISIADGTKAERARNTEIGFNYNDGTFAANGSYFWQTIKDALANPQ------AVREAVNAGYIKNHGYELGASYRTGGLTAKVGVSHSKPRFYDTHKDKLLSANPEFGAQVGRTWTASLAYRFQNPNLEIGWRGRYV-------------------QKATGSILAAGQK----NLENVVRKGFGVNDVFANWKPLGKDT---LNVNLSVNNVFNKFYYPHSQRWTNT--LPGV----------GRDVRLGVNYKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 60921 for 5533 contacts (11.0/contact) +
2D Compatibility (PS) -65729 + (NN) -10026 + (LL) 8268
1D Compatibility (HY) -16400 + (ID) 8500
Total energy: -31466.0 ( -5.69 by residue)
QMean score : 0.190
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