Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENFLYQLEIKTLGQVFTPKNIVDFMLILKHN--HGSVLEPSAGDGSFLKRL-------KKAVGIEIDPKICP----KNALCMDFFDYPLENQFNTIIGNPPYVKHKDIAPSTK-------EK--LHYSLFDERSNLYLFFIEKAIKHLKPKGELIFITPRDFLKSTSSVKLNEWIYKEGTITHFFELGDQKIFPNAMPNCVIFRFCKGDFSRITND----GLQF---V---C-K--KGILYFLN------QSYTQKLSEVFKVKVGAVSGCDKIF--KNE--TYGNLEFVTSITKRTNVLEKMVFVNKPNDYLLQHKDSLMQRKIKKFNENNWFEWGRM---HHISPKKRIYVNAK-THQKNPFFIHQCPNYDGSILALFPYN-QNLDLQNLCDKLNA-INWQELGFVCD-GRFLFSQRSLENALLPKDFLN |
| 2IH2 Chain:A ((21-409)) | ---------------VETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKT-SVYYLG--EVFPQKKVSAVVIRFQKSGKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPLGDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYE------KNHS-----------------GLWMPKERAKELRDFYATPHLVVAHTKGTRVVAAWD-ERAYPWREEFHLLPKEGVRLDPSSLVQWLNSEAMQKHVRTLYRDFVPHLTLRMLERLPVRREYGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135729 for 2655 contacts (-51.1/contact) +
2D Compatibility (PS) -35400 + (NN) -6385 + (LL) 3432
1D Compatibility (HY) -16400 + (ID) 4200
Total energy: -194682.0 ( -73.33 by residue)
QMean score : 0.351
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