Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIKIFSPQYPTELEEFYAERIADNPLGFIQRLDLLPSISGFVQKLREHGGEFFEMRKGEKLIGICGLNHINQTEAE----LCKFHINTAYQSQGLGQKLYESVERYAFIKGYTKISLHVSKSQIKACNLYQKLGF---THIKEEDCVVELGEEALIFPTLFMEKILS
2AE6 Chain:A ((42-147))
-------------------------------------SLAAYQEKMKDE--TIFVAISGQQLAGFIEVHPPTSLAAHQKQWLLSIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQEAHFKEEFYINGHYCDDYQYAYFI------
General information:
TITO was launched using:
RESULT:
Template:
2AE6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45123 for 538 contacts (-83.9/contact) +
2D Compatibility (PS) -10360 + (NN) -2694 + (LL) 3104
1D Compatibility (HY) -8800 + (ID) 1450
Total energy: -65323.0 ( -121.42 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_2AE6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AE6-query.scw
PDB file :
Tito_Scwrl_2AE6.pdb
: